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Arbogen Documentation Guide

Welcome to the Arbogen platform documentation.
This guide consolidates governance principles, GDPR-compliant policies, end-to-end processes, and usage practices.

Overview

Arbogen is a collaborative environment for importing, managing, analyzing, and disseminating biological sequence datasets.

This documentation is organized into the following sections:

Getting Started

Learn about the platform’s key concepts (Sequence, Dataset, Working Group) and navigate the interface effectively.

Governance Data

Understand the legal and organizational framework, including licenses, rights, and GDPR compliance.

Core Concepts

Deep dive into the fundamental entities of the platform, starting with Sequences.

Process Description

Detailed workflows for importing data, including file selection, sequence processing, and import results.

Platform Usage

Learn how to use the platform’s features: manage your account, contribute data, and explore datasets.

Collaboration & Sharing

Work with others through Datasets, Working Groups, and data sharing requests. Learn about DOI minting for citations.

Fields Description

Complete reference of all metadata fields used in the platform.

Territory Code

Geographical encoding standards used throughout the platform.

Legal & Policies

Terms of use, privacy policy, and cookies policy.

Overview